import json
import csv
import os
import sys
sys.path.append(os.path.dirname(os.path.abspath(__file__))+"/task_scripts")
import tempfile
from tasks import execute_task

import argparse

parser = argparse.ArgumentParser()
parser.add_argument("-d", "--work", dest="workdir", help="work directory")
parser.add_argument("-i", "--in", dest="infile", help="json file with task params")
parser.add_argument("-n", "--name", dest="task", help="task name (no spaces)")
parser.add_argument("-o", "--outdir", dest="outdir", help="directory for the final output file")
parser.add_argument("-s", "--sep", dest="separator", default="___TASK STATUS___", help="separator string, after which task status is written")

# read the parameters
options = parser.parse_args()

taskParams = None
with open(options.infile) as paramfile:
    taskParams = json.load(paramfile)


# echo_debug = "echo "+ json.dumps(taskParams) + " > /www/algorithm/debug_file"
# os.system(echo_debug)

task_name = options.task
error = None
try:
    # echo_debug = "echo " + json.dumps(taskParams) + " > /home/wei/lsst/lsst_firefly/backend/debug_file"
    # os.system(echo_debug)
    result, error = execute_task(task_name, taskParams)
except Exception as e:
    result = {"error": str(e)}

fileext = ".json"
if "_type" in taskParams:
    fileext = taskParams["_type"];

(fd, outfile) = tempfile.mkstemp(suffix=fileext, prefix=options.task, dir=options.outdir)
f = os.fdopen(fd, "w")

if fileext == ".json":
    json.dump(result, f)
elif fileext == ".csv":
    for row in result["data"]:
        f.write(row + "\n")

print(options.separator)
if error:
    status = {"error": error}
    print(json.dumps(status))
    sys.exit(1)
else:
    status = {"outfile": outfile}
    echo_debug = "echo " + outfile + " > /home/wei/lsst/lsst_firefly/backend/debug_file"
    print(json.dumps(status))

fa18075480afdb5ce14c5320122017d11367f428
<mask token>

<mask token>
sys.path.append(os.path.dirname(os.path.abspath(__file__)) + '/task_scripts')
<mask token>
parser.add_argument('-d', '--work', dest='workdir', help='work directory')
parser.add_argument('-i', '--in', dest='infile', help=
    'json file with task params')
parser.add_argument('-n', '--name', dest='task', help='task name (no spaces)')
parser.add_argument('-o', '--outdir', dest='outdir', help=
    'directory for the final output file')
parser.add_argument('-s', '--sep', dest='separator', default=
    '___TASK STATUS___', help=
    'separator string, after which task status is written')
<mask token>
with open(options.infile) as paramfile:
    taskParams = json.load(paramfile)
<mask token>
try:
    result, error = execute_task(task_name, taskParams)
except Exception as e:
    result = {'error': str(e)}
<mask token>
if '_type' in taskParams:
    fileext = taskParams['_type']
<mask token>
if fileext == '.json':
    json.dump(result, f)
elif fileext == '.csv':
    for row in result['data']:
        f.write(row + '\n')
print(options.separator)
if error:
    status = {'error': error}
    print(json.dumps(status))
    sys.exit(1)
else:
    status = {'outfile': outfile}
    echo_debug = ('echo ' + outfile +
        ' > /home/wei/lsst/lsst_firefly/backend/debug_file')
    print(json.dumps(status))

<mask token>
sys.path.append(os.path.dirname(os.path.abspath(__file__)) + '/task_scripts')
<mask token>
parser = argparse.ArgumentParser()
parser.add_argument('-d', '--work', dest='workdir', help='work directory')
parser.add_argument('-i', '--in', dest='infile', help=
    'json file with task params')
parser.add_argument('-n', '--name', dest='task', help='task name (no spaces)')
parser.add_argument('-o', '--outdir', dest='outdir', help=
    'directory for the final output file')
parser.add_argument('-s', '--sep', dest='separator', default=
    '___TASK STATUS___', help=
    'separator string, after which task status is written')
options = parser.parse_args()
taskParams = None
with open(options.infile) as paramfile:
    taskParams = json.load(paramfile)
task_name = options.task
error = None
try:
    result, error = execute_task(task_name, taskParams)
except Exception as e:
    result = {'error': str(e)}
fileext = '.json'
if '_type' in taskParams:
    fileext = taskParams['_type']
fd, outfile = tempfile.mkstemp(suffix=fileext, prefix=options.task, dir=
    options.outdir)
f = os.fdopen(fd, 'w')
if fileext == '.json':
    json.dump(result, f)
elif fileext == '.csv':
    for row in result['data']:
        f.write(row + '\n')
print(options.separator)
if error:
    status = {'error': error}
    print(json.dumps(status))
    sys.exit(1)
else:
    status = {'outfile': outfile}
    echo_debug = ('echo ' + outfile +
        ' > /home/wei/lsst/lsst_firefly/backend/debug_file')
    print(json.dumps(status))

import json
import csv
import os
import sys
sys.path.append(os.path.dirname(os.path.abspath(__file__)) + '/task_scripts')
import tempfile
from tasks import execute_task
import argparse
parser = argparse.ArgumentParser()
parser.add_argument('-d', '--work', dest='workdir', help='work directory')
parser.add_argument('-i', '--in', dest='infile', help=
    'json file with task params')
parser.add_argument('-n', '--name', dest='task', help='task name (no spaces)')
parser.add_argument('-o', '--outdir', dest='outdir', help=
    'directory for the final output file')
parser.add_argument('-s', '--sep', dest='separator', default=
    '___TASK STATUS___', help=
    'separator string, after which task status is written')
options = parser.parse_args()
taskParams = None
with open(options.infile) as paramfile:
    taskParams = json.load(paramfile)
task_name = options.task
error = None
try:
    result, error = execute_task(task_name, taskParams)
except Exception as e:
    result = {'error': str(e)}
fileext = '.json'
if '_type' in taskParams:
    fileext = taskParams['_type']
fd, outfile = tempfile.mkstemp(suffix=fileext, prefix=options.task, dir=
    options.outdir)
f = os.fdopen(fd, 'w')
if fileext == '.json':
    json.dump(result, f)
elif fileext == '.csv':
    for row in result['data']:
        f.write(row + '\n')
print(options.separator)
if error:
    status = {'error': error}
    print(json.dumps(status))
    sys.exit(1)
else:
    status = {'outfile': outfile}
    echo_debug = ('echo ' + outfile +
        ' > /home/wei/lsst/lsst_firefly/backend/debug_file')
    print(json.dumps(status))

import json
import csv
import os
import sys
sys.path.append(os.path.dirname(os.path.abspath(__file__))+"/task_scripts")
import tempfile
from tasks import execute_task

import argparse

parser = argparse.ArgumentParser()
parser.add_argument("-d", "--work", dest="workdir", help="work directory")
parser.add_argument("-i", "--in", dest="infile", help="json file with task params")
parser.add_argument("-n", "--name", dest="task", help="task name (no spaces)")
parser.add_argument("-o", "--outdir", dest="outdir", help="directory for the final output file")
parser.add_argument("-s", "--sep", dest="separator", default="___TASK STATUS___", help="separator string, after which task status is written")

# read the parameters
options = parser.parse_args()

taskParams = None
with open(options.infile) as paramfile:
    taskParams = json.load(paramfile)


# echo_debug = "echo "+ json.dumps(taskParams) + " > /www/algorithm/debug_file"
# os.system(echo_debug)

task_name = options.task
error = None
try:
    # echo_debug = "echo " + json.dumps(taskParams) + " > /home/wei/lsst/lsst_firefly/backend/debug_file"
    # os.system(echo_debug)
    result, error = execute_task(task_name, taskParams)
except Exception as e:
    result = {"error": str(e)}

fileext = ".json"
if "_type" in taskParams:
    fileext = taskParams["_type"];

(fd, outfile) = tempfile.mkstemp(suffix=fileext, prefix=options.task, dir=options.outdir)
f = os.fdopen(fd, "w")

if fileext == ".json":
    json.dump(result, f)
elif fileext == ".csv":
    for row in result["data"]:
        f.write(row + "\n")

print(options.separator)
if error:
    status = {"error": error}
    print(json.dumps(status))
    sys.exit(1)
else:
    status = {"outfile": outfile}
    echo_debug = "echo " + outfile + " > /home/wei/lsst/lsst_firefly/backend/debug_file"
    print(json.dumps(status))
