DIR_DATA = "/Users/lp2/data/projects/wildsupp"
DIR_AFS = "%s/seq/Joint-call/afs"%DIR_DATA
DIR_META = "%s/paper/meta"%DIR_DATA
DIR_TABLE = "%s/paper/tables"%DIR_DATA
DIR_PLOT = "%s/paper/plots"%DIR_DATA
DIR_QTL = "%s/paper/tables/qtls"%DIR_DATA
DIR_QTLPLOT = "%s/paper/plots/qtls"%DIR_DATA

SQTL_VERSION = "0.1"
STR_HEADER_CALL_REGIONS = """#sQTL version %s - call QTL regions output
#==========================================
# out_file=%s
# vcf_file=%s
# test sample=%s
# control sample=%s
# af_lenient=%.2f
# sd_lenient=%.1f
# af_stringent=%.2f
# sd_stringent=%.1f
# length_cutoff=%d
#==========================================
"""

import logging
import cPickle

logging.basicConfig(level=logging.DEBUG, format='%(asctime)s %(name)-12s: %(levelname)-8s %(message)s')
LOG = logging.getLogger("Wild suppressors")

84f1459ae4da577036335ad39f2fe81b9b5a87dc
<mask token>

<mask token>
logging.basicConfig(level=logging.DEBUG, format=
    '%(asctime)s %(name)-12s: %(levelname)-8s %(message)s')
<mask token>

DIR_DATA = '/Users/lp2/data/projects/wildsupp'
DIR_AFS = '%s/seq/Joint-call/afs' % DIR_DATA
DIR_META = '%s/paper/meta' % DIR_DATA
DIR_TABLE = '%s/paper/tables' % DIR_DATA
DIR_PLOT = '%s/paper/plots' % DIR_DATA
DIR_QTL = '%s/paper/tables/qtls' % DIR_DATA
DIR_QTLPLOT = '%s/paper/plots/qtls' % DIR_DATA
SQTL_VERSION = '0.1'
STR_HEADER_CALL_REGIONS = """#sQTL version %s - call QTL regions output
#==========================================
# out_file=%s
# vcf_file=%s
# test sample=%s
# control sample=%s
# af_lenient=%.2f
# sd_lenient=%.1f
# af_stringent=%.2f
# sd_stringent=%.1f
# length_cutoff=%d
#==========================================
"""
<mask token>
logging.basicConfig(level=logging.DEBUG, format=
    '%(asctime)s %(name)-12s: %(levelname)-8s %(message)s')
LOG = logging.getLogger('Wild suppressors')

DIR_DATA = '/Users/lp2/data/projects/wildsupp'
DIR_AFS = '%s/seq/Joint-call/afs' % DIR_DATA
DIR_META = '%s/paper/meta' % DIR_DATA
DIR_TABLE = '%s/paper/tables' % DIR_DATA
DIR_PLOT = '%s/paper/plots' % DIR_DATA
DIR_QTL = '%s/paper/tables/qtls' % DIR_DATA
DIR_QTLPLOT = '%s/paper/plots/qtls' % DIR_DATA
SQTL_VERSION = '0.1'
STR_HEADER_CALL_REGIONS = """#sQTL version %s - call QTL regions output
#==========================================
# out_file=%s
# vcf_file=%s
# test sample=%s
# control sample=%s
# af_lenient=%.2f
# sd_lenient=%.1f
# af_stringent=%.2f
# sd_stringent=%.1f
# length_cutoff=%d
#==========================================
"""
import logging
import cPickle
logging.basicConfig(level=logging.DEBUG, format=
    '%(asctime)s %(name)-12s: %(levelname)-8s %(message)s')
LOG = logging.getLogger('Wild suppressors')

DIR_DATA = "/Users/lp2/data/projects/wildsupp"
DIR_AFS = "%s/seq/Joint-call/afs"%DIR_DATA
DIR_META = "%s/paper/meta"%DIR_DATA
DIR_TABLE = "%s/paper/tables"%DIR_DATA
DIR_PLOT = "%s/paper/plots"%DIR_DATA
DIR_QTL = "%s/paper/tables/qtls"%DIR_DATA
DIR_QTLPLOT = "%s/paper/plots/qtls"%DIR_DATA

SQTL_VERSION = "0.1"
STR_HEADER_CALL_REGIONS = """#sQTL version %s - call QTL regions output
#==========================================
# out_file=%s
# vcf_file=%s
# test sample=%s
# control sample=%s
# af_lenient=%.2f
# sd_lenient=%.1f
# af_stringent=%.2f
# sd_stringent=%.1f
# length_cutoff=%d
#==========================================
"""

import logging
import cPickle

logging.basicConfig(level=logging.DEBUG, format='%(asctime)s %(name)-12s: %(levelname)-8s %(message)s')
LOG = logging.getLogger("Wild suppressors")
