
INPUT_DIR = '/home/cmb-panasas2/wenzhenl/benchmark/gene_level/hg38/SRP102021_human'
OUT_DIR = '/staging/as/skchoudh/benchmark/gene_level/hg38/SRP102021_human'
OFFSET_FILE = '/home/cmb-panasas2/skchoudh/github_projects/ribocop-results/tools/ribORF/offsets/hg38/SRP102021_ribo_SRX2647167.offset.txt'
CANDIDATE_ORFS = '/home/cmb-panasas2/skchoudh/genomes/hg38/ribORF_annotation/candidateORF.genepred.txt'

816be4e7809264791f6bcba9b6e80220464cf5bb
<mask token>

INPUT_DIR = (
    '/home/cmb-panasas2/wenzhenl/benchmark/gene_level/hg38/SRP102021_human')
OUT_DIR = '/staging/as/skchoudh/benchmark/gene_level/hg38/SRP102021_human'
OFFSET_FILE = (
    '/home/cmb-panasas2/skchoudh/github_projects/ribocop-results/tools/ribORF/offsets/hg38/SRP102021_ribo_SRX2647167.offset.txt'
    )
CANDIDATE_ORFS = (
    '/home/cmb-panasas2/skchoudh/genomes/hg38/ribORF_annotation/candidateORF.genepred.txt'
    )


INPUT_DIR = '/home/cmb-panasas2/wenzhenl/benchmark/gene_level/hg38/SRP102021_human'
OUT_DIR = '/staging/as/skchoudh/benchmark/gene_level/hg38/SRP102021_human'
OFFSET_FILE = '/home/cmb-panasas2/skchoudh/github_projects/ribocop-results/tools/ribORF/offsets/hg38/SRP102021_ribo_SRX2647167.offset.txt'
CANDIDATE_ORFS = '/home/cmb-panasas2/skchoudh/genomes/hg38/ribORF_annotation/candidateORF.genepred.txt'
