Add 3BPA_test_dih_beta150 files
Browse files- README.md +55 -0
- co/co_0.parquet +3 -0
- ds.parquet +3 -0
README.md
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---
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configs:
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- config_name: default
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data_files: "co/*.parquet"
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- config_name: info
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data_files: "ds.parquet"
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license: cc-by-4.0
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tags:
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- molecular dynamics
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- mlip
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- interatomic potential
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pretty_name: 3BPA test dih beta150
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---
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### <details><summary>Cite this dataset </summary>Kovács, D. P., Oord, C., Kucera, J., Allen, A. E. A., Cole, D. J., Ortner, C., and Csányi, G. _3BPA test dih beta150_. ColabFit, 2023. https://doi.org/10.60732/1c4b1e1c</details>
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#### This dataset has been curated and formatted for the ColabFit Exchange
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#### This dataset is also available on the ColabFit Exchange:
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https://materials.colabfit.org/id/DS_199ama4h9t7m_0
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#### Visit the ColabFit Exchange to search additional datasets by author, description, element content and more.
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https://materials.colabfit.org
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<br><hr>
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# Dataset Name
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3BPA test dih beta150
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### Description
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Test configurations with fixed value for dihedral beta in alpha-gamma plane of 150 degreesfrom 3BPA dataset. Used to showcase the performance of linear atomic cluster expansion (ACE) force fields in a machine learning model to predict the potential energy surfaces of organic molecules.
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### Dataset authors
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Dávid Péter Kovács, Cas van der Oord, Jiri Kucera, Alice E. A. Allen, Daniel J. Cole, Christoph Ortner, Gábor Csányi
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### Publication
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https://doi.org/10.1021/acs.jctc.1c00647
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### Original data link
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https://doi.org/10.1021/acs.jctc.1c00647
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### License
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CC-BY-4.0
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### Number of unique molecular configurations
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2350
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### Number of atoms
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63450
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### Elements included
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C, H, N, O
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### Properties included
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energy, atomic forces, cauchy stress
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<br>
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<hr>
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# Usage
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- `ds.parquet` : Aggregated dataset information.
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- `co/` directory: Configuration rows each include a structure, calculated properties, and metadata.
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- `cs/` directory : Configuration sets are subsets of configurations grouped by some common characteristic. If `cs/` does not exist, no configurations sets have been defined for this dataset.
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- `cs_co_map/` directory : The mapping of configurations to configuration sets (if defined).
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<br>
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#### ColabFit Exchange documentation includes descriptions of content and example code for parsing parquet files:
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- [Parquet parsing: example code](https://materials.colabfit.org/docs/how_to_use_parquet)
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- [Dataset info schema](https://materials.colabfit.org/docs/dataset_schema)
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- [Configuration schema](https://materials.colabfit.org/docs/configuration_schema)
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- [Configuration set schema](https://materials.colabfit.org/docs/configuration_set_schema)
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- [Configuration set to configuration mapping schema](https://materials.colabfit.org/docs/cs_co_mapping_schema)
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co/co_0.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:dc20b7312b1f7e8938e30cbb7f8609ac31be98385cafa06fb28aeac1f06e690c
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size 3652692
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ds.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:3064e26aadeea0e3f48861fa48d4e51373920f8bc8cedbb573c8ed19e1a95f5a
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size 17224
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