Trialstreamer: Mapping and Browsing Medical Evidence in Real-Time
Table 1: Macro-averaged scores for ICO span prediction at both the token and clinical entity level.
['[EMPTY]', 'F1', 'Precision', 'Recall']
Since these spans will serve as inputs to downstream models in the pipeline, high recall at the expense of precision is preferable; we will allow subsequent classifiers to discard spurious spans. We achieve 0.87 recall at the clinical concept level.