lfs add pretraining file

.gitattributes

@@ -53,3 +53,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
 *.jpg filter=lfs diff=lfs merge=lfs -text
 *.jpeg filter=lfs diff=lfs merge=lfs -text
 *.webp filter=lfs diff=lfs merge=lfs -text
+*.csv filter=lfs diff=lfs merge=lfs -text

README.md

@@ -5,6 +5,13 @@ tags:
 - biology
 - botany
 pretty_name: GreenBeing
+configs:
+- config_name: default
+  data_files:
+  - split: pretraining
+    path: "proteins_pretraining.csv"
+  - split: finetuning
+    path: "proteins_finetuning.csv"
 ---
 
 # GreenBeing Proteins dataset
@@ -15,11 +22,12 @@ Amino acid sequences use [IUPAC-IUB codes](https://en.wikipedia.org/wiki/FASTA_f
 XML source from https://www.uniprot.org/help/downloads <br/>
 CoLab notebook: https://colab.research.google.com/drive/1M6sO0Ws6i5z9VUXIXopiOqo1OkQ7K-1g?usp=sharing
 
-## Pretraining set (TODO)
+## Pretraining set
 
 Amino acid sequences for **unreviewed proteins (TrEMBL)**
 
-Each row contains a species or subspecies name (for filtering), and the amino acid sequence.
+Each row contains a species or subspecies name (for filtering), and the amino acid sequence of a protein.
+Large proteins are split into a new row every 8,000 letters.
 
 ### Share of taxa
 
@@ -72,4 +80,4 @@ The reviewed sequences are often similar to unreviewed sequences from related sp
 
 Species include inedible wild relatives.<br/>
 Some people have allergic reactions to wheat/gluten, nightshades, maize, and other crops.<br/>
-Chili peppers can be painfully spicy.
+Chili peppers can be painfully spicy.

proteins_finetuning.csv

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:10a5e47706233410fe8bf5829766d0491422f533431bb3773793cfc20afbbaa2
+size 7227627

proteins_pretraining.csv

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:cf9a4fd56c0b88a5d4d48eeda60fae8b28cbac962faba72686242f286bc73977
+size 1540835223