last changes and deploy it

app-demo-myMultiNER.py

@@ -76,8 +76,8 @@ examples = [
 
 
 
-models_List = ["FacebookAI/xlm-roberta-large-finetuned-conll03-english",  "Babelscape/wikineural-multilingual-ner",  "blaze999/Medical-NER", "urchade/gliner_large-v2.1", "urchade/gliner_large_bio-v0.1", "NCBO/BioPortal" ] # "urchade/gliner_large-v2.1",  "knowledgator/gliner-multitask-large-v0.5"
-#models_List = ["Babelscape/wikineural-multilingual-ner",  "urchade/gliner_large-v2.1", "NCBO/BioPortal" ] # "urchade/gliner_large-v2.1",  "knowledgator/gliner-multitask-large-v0.5"
+#models_List = ["FacebookAI/xlm-roberta-large-finetuned-conll03-english",  "Babelscape/wikineural-multilingual-ner",  "blaze999/Medical-NER", "urchade/gliner_large-v2.1", "urchade/gliner_large_bio-v0.1", "NCBO/BioPortal" ] # "urchade/gliner_large-v2.1",  "knowledgator/gliner-multitask-large-v0.5"
+models_List = ["Babelscape/wikineural-multilingual-ner",  "urchade/gliner_large-v2.1", "NCBO/BioPortal" ] # "urchade/gliner_large-v2.1",  "knowledgator/gliner-multitask-large-v0.5"
 #models_List = ["NCBO/BioPortal" ]
 
 #categories_List = ["MED","LOC","PER","ORG","DATE","MISC"]
@@ -168,8 +168,8 @@ def get_urls(word, df_annotated_combined):
                 # Insert the URL at the first position
                 urls.insert(0, firsturlinlist)
 
-        html_links = "<br>".join([f'<a href="https://expl-rels-dev-vast.apps.ocpt.jrc.ec.europa.eu/?concept={url}" target="_blank">{url}</a>' for url in urls])
-        #html_links = "<br>".join([f'<a href="https://api-vast.jrc.service.ec.europa.eu/describe//?url={url}" target="_blank">{url}</a>' for url in urls])
+        #html_links = "<br>".join([f'<a href="https://expl-rels-dev-vast.apps.ocpt.jrc.ec.europa.eu/?concept={url}" target="_blank">{url}</a>' for url in urls])
+        html_links = "<br>".join([f'<a href="https://api-vast.jrc.service.ec.europa.eu/describe//?url={url}" target="_blank">{url}</a>' for url in urls])
         return html_links
     return ""
 
@@ -224,7 +224,7 @@ def nerBio(text, ModelsSelection, CategoriesSelection, ScoreFilt, EntityLinking,
                         help="List of ontologies to which restrict the entity linking task.")
     #consose 20250502:
     if Counter(KGchoices) == Counter(POSSIBLE_KGchoices_List):
-        parser.add_argument("--USE_CACHE", type=str, default="True",
+        parser.add_argument("--USE_CACHE", type=str, default="False",
                             help="whether to use cache for the NER and NEL tasks or not")
     else:
         #print("Lists do not have the same elements")
@@ -550,16 +550,16 @@ def nerBio(text, ModelsSelection, CategoriesSelection, ScoreFilt, EntityLinking,
 
             # # Create a new column for the entities with links
             df_annotated_combined['entity_with_link'] = df_annotated_combined.apply(
+                #lambda row: (
+                #    f"<a href='https://expl-rels-dev-vast.apps.ocpt.jrc.ec.europa.eu/?concept={row['namedEntity']}' target='_blank'>{row['word']}</a>"
+                #        if row['namedEntity'] not in [None, '', 'NaN', 'nan'] and pd.notnull(row['namedEntity']) else row[
+                #        'word']
+                #),
                 lambda row: (
-                    f"<a href='https://expl-rels-dev-vast.apps.ocpt.jrc.ec.europa.eu/?concept={row['namedEntity']}' target='_blank'>{row['word']}</a>"
+                    f"<a href='https://api-vast.jrc.service.ec.europa.eu/describe//?url={row['namedEntity']}' target='_blank'>{row['word']}</a>"
                     if row['namedEntity'] not in [None, '', 'NaN', 'nan'] and pd.notnull(row['namedEntity']) else row[
                         'word']
                 ),
-                #lambda row: (
-                #    f"<a href='https://api-vast.jrc.service.ec.europa.eu/describe//?url={row['namedEntity']}' target='_blank'>{row['word']}</a>"
-                #    if row['namedEntity'] not in [None, '', 'NaN', 'nan'] and pd.notnull(row['namedEntity']) else row[
-                #        'word']
-                #),
                 axis=1
             )
 
@@ -681,8 +681,8 @@ def update_urls(selected_word, state):
                     urls.insert(0, firsturlinlist)
 
             # Convert list of URLs to HTML string with clickable links
-            html_links = "<br>".join([f'<a href="https://expl-rels-dev-vast.apps.ocpt.jrc.ec.europa.eu/?concept={url}" target="_blank">{url}</a>' for url in urls])
-            #html_links = "<br>".join([f'<a href="https://api-vast.jrc.service.ec.europa.eu/describe//?url={url}" target="_blank">{url}</a>' for url in urls])
+            #html_links = "<br>".join([f'<a href="https://expl-rels-dev-vast.apps.ocpt.jrc.ec.europa.eu/?concept={url}" target="_blank">{url}</a>' for url in urls])
+            html_links = "<br>".join([f'<a href="https://api-vast.jrc.service.ec.europa.eu/describe//?url={url}" target="_blank">{url}</a>' for url in urls])
             return html_links
         return ""