"""
TransFIC
========
"""

#import distribute_setup
#distribute_setup.use_setuptools()

from setuptools import setup, find_packages

from transfic import VERSION, AUTHORS, AUTHORS_EMAIL
	
setup(
	name = "TransFIC",
	version = VERSION,
	packages = find_packages(),

	install_requires = [
		"bgcore>=0.3.1",
	],

	scripts = [
		"bin/transfic-perf-init",
		"bin/transfic-perf-scores",
	],

	entry_points = {
		'console_scripts': [
			'transfic-obo-to-map = transfic.command.obo_to_map:main',
			'transfic-vcf-to-snvs = transfic.command.vcf_to_snvs:main',
			'transfic-filter-transcripts = transfic.command.filter_transcripts:main',
			'transfic-esp6500-to-snvs = transfic.command.esp6500_to_snvs:main',
			'transfic-blt-partial = transfic.command.blt_partial:main',
			'transfic-blt-groups = transfic.command.blt_groups:main',
			'transfic-calc = transfic.command.calc:main',
			'transfic-calc-label = transfic.command.calc_label:main',
			'transfic-perf-plot = transfic.command.perf_plot:main',
			'transfic-perf-cosmic = transfic.command.perf_cosmic:main',
			'transfic-perf-cosmic52 = transfic.command.perf_cosmic52:main',
			'transfic-cutoffs = transfic.command.cutoffs:main',
			'transfic-cutoffs-plot = transfic.command.cutoffs_plot:main'
		]
	},

	# metadata for upload to PyPI
	author = AUTHORS,
	author_email = AUTHORS_EMAIL,
	description = "TransFIC",
	license = "UPF Free Source Code",
	keywords = "",
	url = "https://bitbucket.org/bbglab/transfic",
	long_description = __doc__,

	classifiers = [
		"Development Status :: 4 - Beta",
		"Intended Audience :: Bioinformatics",
		"Environment :: Console",
		"Intended Audience :: Science/Research",
		"Natural Language :: English",
		"Operating System :: OS Independent",
		"Programming Language :: Python",
		"Programming Language :: Python :: 2.7",
		"Topic :: Scientific/Engineering",
		"Topic :: Scientific/Engineering :: Bio-Informatics"
	]
)

b4006a6e014fd2d7db86bd9d5cc44b541a741f9f
<mask token>

<mask token>
setup(name='TransFIC', version=VERSION, packages=find_packages(),
    install_requires=['bgcore>=0.3.1'], scripts=['bin/transfic-perf-init',
    'bin/transfic-perf-scores'], entry_points={'console_scripts': [
    'transfic-obo-to-map = transfic.command.obo_to_map:main',
    'transfic-vcf-to-snvs = transfic.command.vcf_to_snvs:main',
    'transfic-filter-transcripts = transfic.command.filter_transcripts:main',
    'transfic-esp6500-to-snvs = transfic.command.esp6500_to_snvs:main',
    'transfic-blt-partial = transfic.command.blt_partial:main',
    'transfic-blt-groups = transfic.command.blt_groups:main',
    'transfic-calc = transfic.command.calc:main',
    'transfic-calc-label = transfic.command.calc_label:main',
    'transfic-perf-plot = transfic.command.perf_plot:main',
    'transfic-perf-cosmic = transfic.command.perf_cosmic:main',
    'transfic-perf-cosmic52 = transfic.command.perf_cosmic52:main',
    'transfic-cutoffs = transfic.command.cutoffs:main',
    'transfic-cutoffs-plot = transfic.command.cutoffs_plot:main']}, author=
    AUTHORS, author_email=AUTHORS_EMAIL, description='TransFIC', license=
    'UPF Free Source Code', keywords='', url=
    'https://bitbucket.org/bbglab/transfic', long_description=__doc__,
    classifiers=['Development Status :: 4 - Beta',
    'Intended Audience :: Bioinformatics', 'Environment :: Console',
    'Intended Audience :: Science/Research', 'Natural Language :: English',
    'Operating System :: OS Independent', 'Programming Language :: Python',
    'Programming Language :: Python :: 2.7',
    'Topic :: Scientific/Engineering',
    'Topic :: Scientific/Engineering :: Bio-Informatics'])

<mask token>
from setuptools import setup, find_packages
from transfic import VERSION, AUTHORS, AUTHORS_EMAIL
setup(name='TransFIC', version=VERSION, packages=find_packages(),
    install_requires=['bgcore>=0.3.1'], scripts=['bin/transfic-perf-init',
    'bin/transfic-perf-scores'], entry_points={'console_scripts': [
    'transfic-obo-to-map = transfic.command.obo_to_map:main',
    'transfic-vcf-to-snvs = transfic.command.vcf_to_snvs:main',
    'transfic-filter-transcripts = transfic.command.filter_transcripts:main',
    'transfic-esp6500-to-snvs = transfic.command.esp6500_to_snvs:main',
    'transfic-blt-partial = transfic.command.blt_partial:main',
    'transfic-blt-groups = transfic.command.blt_groups:main',
    'transfic-calc = transfic.command.calc:main',
    'transfic-calc-label = transfic.command.calc_label:main',
    'transfic-perf-plot = transfic.command.perf_plot:main',
    'transfic-perf-cosmic = transfic.command.perf_cosmic:main',
    'transfic-perf-cosmic52 = transfic.command.perf_cosmic52:main',
    'transfic-cutoffs = transfic.command.cutoffs:main',
    'transfic-cutoffs-plot = transfic.command.cutoffs_plot:main']}, author=
    AUTHORS, author_email=AUTHORS_EMAIL, description='TransFIC', license=
    'UPF Free Source Code', keywords='', url=
    'https://bitbucket.org/bbglab/transfic', long_description=__doc__,
    classifiers=['Development Status :: 4 - Beta',
    'Intended Audience :: Bioinformatics', 'Environment :: Console',
    'Intended Audience :: Science/Research', 'Natural Language :: English',
    'Operating System :: OS Independent', 'Programming Language :: Python',
    'Programming Language :: Python :: 2.7',
    'Topic :: Scientific/Engineering',
    'Topic :: Scientific/Engineering :: Bio-Informatics'])

"""
TransFIC
========
"""

#import distribute_setup
#distribute_setup.use_setuptools()

from setuptools import setup, find_packages

from transfic import VERSION, AUTHORS, AUTHORS_EMAIL
	
setup(
	name = "TransFIC",
	version = VERSION,
	packages = find_packages(),

	install_requires = [
		"bgcore>=0.3.1",
	],

	scripts = [
		"bin/transfic-perf-init",
		"bin/transfic-perf-scores",
	],

	entry_points = {
		'console_scripts': [
			'transfic-obo-to-map = transfic.command.obo_to_map:main',
			'transfic-vcf-to-snvs = transfic.command.vcf_to_snvs:main',
			'transfic-filter-transcripts = transfic.command.filter_transcripts:main',
			'transfic-esp6500-to-snvs = transfic.command.esp6500_to_snvs:main',
			'transfic-blt-partial = transfic.command.blt_partial:main',
			'transfic-blt-groups = transfic.command.blt_groups:main',
			'transfic-calc = transfic.command.calc:main',
			'transfic-calc-label = transfic.command.calc_label:main',
			'transfic-perf-plot = transfic.command.perf_plot:main',
			'transfic-perf-cosmic = transfic.command.perf_cosmic:main',
			'transfic-perf-cosmic52 = transfic.command.perf_cosmic52:main',
			'transfic-cutoffs = transfic.command.cutoffs:main',
			'transfic-cutoffs-plot = transfic.command.cutoffs_plot:main'
		]
	},

	# metadata for upload to PyPI
	author = AUTHORS,
	author_email = AUTHORS_EMAIL,
	description = "TransFIC",
	license = "UPF Free Source Code",
	keywords = "",
	url = "https://bitbucket.org/bbglab/transfic",
	long_description = __doc__,

	classifiers = [
		"Development Status :: 4 - Beta",
		"Intended Audience :: Bioinformatics",
		"Environment :: Console",
		"Intended Audience :: Science/Research",
		"Natural Language :: English",
		"Operating System :: OS Independent",
		"Programming Language :: Python",
		"Programming Language :: Python :: 2.7",
		"Topic :: Scientific/Engineering",
		"Topic :: Scientific/Engineering :: Bio-Informatics"
	]
)
